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  5. AT5G40460

AT5G40460


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0004236 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40460
Cluster HCCA: Cluster_77


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009694 jasmonic acid metabolic process RCA Interproscan
BP GO:0009753 response to jasmonic acid RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006354 DNA-templated transcription, elongation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009875 pollen-pistil interaction IEP HCCA
BP GO:0010042 response to manganese ion IEP HCCA
BP GO:0010045 response to nickel cation IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048530 fruit morphogenesis IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0080060 integument development IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G40460