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  5. AT5G41110

AT5G41110


Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26890.5); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0003097 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G41110
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_220V3.1 No alias No annotation 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0000104 succinate dehydrogenase activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 thiol-dependent deubiquitinase IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007602 phototransduction IEP HCCA
MF GO:0008158 hedgehog receptor activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009585 red, far-red light phototransduction IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010942 positive regulation of cell death IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0043068 positive regulation of programmed cell death IEP HCCA
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
CC GO:0045283 fumarate reductase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR025261 DUF4210 356 402
IPR033473 FAM214/SPAC3H8.04_C 548 620
PLAZA 3.0 Dicots AT5G41110