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  5. AT5G46630

AT5G46630


Description : Clathrin adaptor complexes medium subunit family protein


Gene families : OG_01_0005398 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G46630
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cre16.g685277 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g27000.1 No alias medium subunit mu of AP-2 cargo adaptor complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_2250V3.1 No alias Clathrin adaptor complexes medium subunit family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006886 intracellular protein transport ISS Interproscan
BP GO:0006897 endocytosis IDA Interproscan
CC GO:0030125 clathrin vesicle coat ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000224 peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006651 diacylglycerol biosynthetic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006900 vesicle budding from membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008180 COP9 signalosome IEP HCCA
MF GO:0008195 phosphatidate phosphatase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009636 response to toxic substance IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0010188 response to microbial phytotoxin IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010387 COP9 signalosome assembly IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016929 SUMO-specific protease activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042814 monopolar cell growth IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0043230 extracellular organelle IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0046339 diacylglycerol metabolic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
CC GO:0065010 extracellular membrane-bounded organelle IEP HCCA
CC GO:0070062 extracellular exosome IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1900150 regulation of defense response to fungus IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901703 protein localization involved in auxin polar transport IEP HCCA
CC GO:1903561 extracellular vesicle IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 167 438
PLAZA 3.0 Dicots AT5G46630