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  5. AT5G47175

AT5G47175


Description : low-molecular-weight cysteine-rich 3


Gene families : OG_01_0000776 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G47175
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT2G10535 No alias low-molecular-weight cysteine-rich 29 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20993 No alias low-molecular-weight cysteine-rich 56 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G20997 No alias low-molecular-weight cysteine-rich 55 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G43505 No alias low-molecular-weight cysteine-rich 30 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61172 No alias low-molecular-weight cysteine-rich 8 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61175 No alias low-molecular-weight cysteine-rich 52 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61182 No alias low-molecular-weight cysteine-rich 54 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42797 No alias low-molecular-weight cysteine-rich 28 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G47075 No alias low-molecular-weight cysteine-rich 20 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006885 regulation of pH IEP HCCA
BP GO:0007035 vacuolar acidification IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0010023 proanthocyanidin biosynthetic process IEP HCCA
BP GO:0010231 maintenance of seed dormancy IEP HCCA
MF GO:0015299 solute:proton antiporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active ion transmembrane transporter activity IEP HCCA
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP HCCA
BP GO:0030641 regulation of cellular pH IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045851 pH reduction IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0051452 intracellular pH reduction IEP HCCA
BP GO:0051453 regulation of intracellular pH IEP HCCA
BP GO:0055067 monovalent inorganic cation homeostasis IEP HCCA
BP GO:0097437 maintenance of dormancy IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR010851 DEFL 23 76
PLAZA 3.0 Dicots AT5G47175