AT5G47320


Description : ribosomal protein S19


Gene families : OG_01_0001226 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G47320
Cluster HCCA: Cluster_117


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005763 mitochondrial small ribosomal subunit IDA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
BP GO:0006412 translation NAS Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042780 tRNA 3'-end processing IEP HCCA
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043628 ncRNA 3'-end processing IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0072507 divalent inorganic cation homeostasis IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 33 102
IPR002222 Ribosomal_S19 134 208
PLAZA 3.0 Dicots AT5G47320