AT5G47560

Description : tonoplast dicarboxylate transporter

Gene families : OG_01_0003405 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003405_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G47560
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp2g15110.1	No alias	di-/tricarboxylate transporter (TDT)	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_15560V3.1	No alias	tonoplast dicarboxylate transporter	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005310	dicarboxylic acid transmembrane transporter activity	None	Extended
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
MF	GO:0005343	organic acid:sodium symporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006814	sodium ion transport	ISS	Interproscan
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006835	dicarboxylic acid transport	ISS	Interproscan
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006885	regulation of pH	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0008514	organic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015081	sodium ion transmembrane transporter activity	None	Extended
MF	GO:0015140	malate transmembrane transporter activity	IDA	Interproscan
MF	GO:0015140	malate transmembrane transporter activity	IMP	Interproscan
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015293	symporter activity	None	Extended
MF	GO:0015294	solute:cation symporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015370	solute:sodium symporter activity	None	Extended
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015740	C4-dicarboxylate transport	None	Extended
BP	GO:0015743	malate transport	TAS	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
MF	GO:0017153	sodium:dicarboxylate symporter activity	ISS	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	None	Extended
BP	GO:0030641	regulation of cellular pH	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0035725	sodium ion transmembrane transport	ISS	Interproscan
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051453	regulation of intracellular pH	TAS	Interproscan
BP	GO:0055067	monovalent inorganic cation homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000257	nitrilase activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005887	integral component of plasma membrane	IEP	HCCA
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008515	sucrose transmembrane transporter activity	IEP	HCCA
BP	GO:0008643	carbohydrate transport	IEP	HCCA
BP	GO:0009638	phototropism	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009835	fruit ripening	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009954	proximal/distal pattern formation	IEP	HCCA
BP	GO:0010099	regulation of photomorphogenesis	IEP	HCCA
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015154	disaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015157	oligosaccharide transmembrane transporter activity	IEP	HCCA
BP	GO:0015766	disaccharide transport	IEP	HCCA
BP	GO:0015770	sucrose transport	IEP	HCCA
BP	GO:0015772	oligosaccharide transport	IEP	HCCA
BP	GO:0015996	chlorophyll catabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0016021	integral component of membrane	IEP	HCCA
MF	GO:0016815	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles	IEP	HCCA
MF	GO:0018822	nitrile hydratase activity	IEP	HCCA
CC	GO:0031224	intrinsic component of membrane	IEP	HCCA
CC	GO:0031226	intrinsic component of plasma membrane	IEP	HCCA
BP	GO:0033015	tetrapyrrole catabolic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0046149	pigment catabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
MF	GO:0051119	sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0080061	indole-3-acetonitrile nitrilase activity	IEP	HCCA
MF	GO:0080109	indole-3-acetonitrile nitrile hydratase activity	IEP	HCCA
BP	GO:2000030	regulation of response to red or far red light	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001898	SLC13A/DASS	70	527

External Links

PLAZA 3.0 Dicots	AT5G47560

AT5G47560

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation