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AT5G48650


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain


Gene families : OG_01_0000460 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48650
Cluster HCCA: Cluster_152


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006913 nucleocytoplasmic transport ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004407 histone deacetylase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005945 6-phosphofructokinase complex IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030856 regulation of epithelial cell differentiation IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
MF GO:0033558 protein deacetylase activity IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045604 regulation of epidermal cell differentiation IEP HCCA
BP GO:0045682 regulation of epidermis development IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2 16 133
IPR000504 RRM_dom 321 379
PLAZA 3.0 Dicots AT5G48650