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  5. AT5G49680

AT5G49680


No description available


Gene families : OG_01_0003767 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003767_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G49680
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Pp3c12_12980V3.1 No alias Golgi-body localisation protein domain ;RNA pol II... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0004835 tubulin-tyrosine ligase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005343 organic acid:sodium symporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0008508 bile acid:sodium symporter activity IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
MF GO:0015125 bile acid transmembrane transporter activity IEP HCCA
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP HCCA
MF GO:0015370 solute:sodium symporter activity IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033233 regulation of protein sumoylation IEP HCCA
BP GO:0033234 negative regulation of protein sumoylation IEP HCCA
MF GO:0035197 siRNA binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140161 monocarboxylate:sodium symporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP HCCA
BP GO:1903320 regulation of protein modification by small protein conjugation or removal IEP HCCA
BP GO:1903321 negative regulation of protein modification by small protein conjugation or removal IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G49680