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  5. AT5G50890

AT5G50890


Description : alpha/beta-Hydrolases superfamily protein


Gene families : OG_01_0001553 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50890
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT5G24180 No alias Lipase class 3-related protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006379 mRNA cleavage IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
MF GO:0008469 histone-arginine N-methyltransferase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009652 thigmotropism IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP HCCA
MF GO:0010428 methyl-CpNpG binding IEP HCCA
MF GO:0010429 methyl-CpNpN binding IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
CC GO:0010445 nuclear dicing body IEP HCCA
BP GO:0010589 leaf proximal/distal pattern formation IEP HCCA
MF GO:0016273 arginine N-methyltransferase activity IEP HCCA
MF GO:0016274 protein-arginine N-methyltransferase activity IEP HCCA
MF GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018195 peptidyl-arginine modification IEP HCCA
BP GO:0018216 peptidyl-arginine methylation IEP HCCA
BP GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031054 pre-miRNA processing IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0031445 regulation of heterochromatin assembly IEP HCCA
BP GO:0031453 positive regulation of heterochromatin assembly IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034969 histone arginine methylation IEP HCCA
BP GO:0034970 histone H3-R2 methylation IEP HCCA
BP GO:0034971 histone H3-R17 methylation IEP HCCA
BP GO:0034972 histone H3-R26 methylation IEP HCCA
MF GO:0035198 miRNA binding IEP HCCA
MF GO:0035241 protein-arginine omega-N monomethyltransferase activity IEP HCCA
MF GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity IEP HCCA
BP GO:0035246 peptidyl-arginine N-methylation IEP HCCA
BP GO:0035247 peptidyl-arginine omega-N-methylation IEP HCCA
BP GO:0035279 mRNA cleavage involved in gene silencing by miRNA IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
MF GO:0061980 regulatory RNA binding IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0080120 CAAX-box protein maturation IEP HCCA
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0120261 regulation of heterochromatin organization IEP HCCA
BP GO:0120263 positive regulation of heterochromatin organization IEP HCCA
BP GO:1902275 regulation of chromatin organization IEP HCCA
BP GO:1905269 positive regulation of chromatin organization IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G50890