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  5. AT5G52580

AT5G52580


Description : RabGAP/TBC domain-containing protein


Gene families : OG_01_0006877 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52580
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Pp3c20_14740V3.1 No alias RabGAP/TBC domain-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004661 protein geranylgeranyltransferase activity IEP HCCA
MF GO:0004662 CAAX-protein geranylgeranyltransferase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005953 CAAX-protein geranylgeranyltransferase complex IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0018344 protein geranylgeranylation IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046620 regulation of organ growth IEP HCCA
BP GO:0046621 negative regulation of organ growth IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048317 seed morphogenesis IEP HCCA
BP GO:0048482 plant ovule morphogenesis IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051125 regulation of actin nucleation IEP HCCA
BP GO:0051127 positive regulation of actin nucleation IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051446 positive regulation of meiotic cell cycle IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 378 606
IPR021935 SGSM1/2_RBD 99 188
PLAZA 3.0 Dicots AT5G52580