AT5G52980


Description : CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0008542 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008542_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52980
Cluster HCCA: Cluster_25


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006148 inosine catabolic process IEP HCCA
BP GO:0006152 purine nucleoside catabolic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008477 purine nucleosidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
CC GO:0031082 BLOC complex IEP HCCA
CC GO:0031083 BLOC-1 complex IEP HCCA
CC GO:0031501 mannosyltransferase complex IEP HCCA
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045324 late endosome to vacuole transport IEP HCCA
BP GO:0046102 inosine metabolic process IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046130 purine ribonucleoside catabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0047724 inosine nucleosidase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G52980