AT5G55160

Description : small ubiquitin-like modifier 2

Gene families : OG_01_0000800 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G55160
Cluster	HCCA: Cluster_242

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre16.g675637	No alias	Protein degradation.peptide...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_8940V3.1	No alias	small ubiquitin-like modifier 1	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006555	methionine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008380	RNA splicing	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009066	aspartate family amino acid metabolic process	None	Extended
BP	GO:0009067	aspartate family amino acid biosynthetic process	None	Extended
BP	GO:0009086	methionine biosynthetic process	RCA	Interproscan
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016925	protein sumoylation	IDA	Interproscan
BP	GO:0016925	protein sumoylation	IEP	Interproscan
BP	GO:0016925	protein sumoylation	RCA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
MF	GO:0031386	protein tag	IDA	Interproscan
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0000338	protein deneddylation	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	HCCA
BP	GO:0000725	recombinational repair	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004633	phosphopantothenoylcysteine decarboxylase activity	IEP	HCCA
MF	GO:0004798	thymidylate kinase activity	IEP	HCCA
CC	GO:0005654	nucleoplasm	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
CC	GO:0005853	eukaryotic translation elongation factor 1 complex	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006312	mitotic recombination	IEP	HCCA
BP	GO:0006351	transcription, DNA-templated	IEP	HCCA
BP	GO:0006352	DNA-templated transcription, initiation	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
BP	GO:0007062	sister chromatid cohesion	IEP	HCCA
BP	GO:0007127	meiosis I	IEP	HCCA
BP	GO:0007131	reciprocal meiotic recombination	IEP	HCCA
BP	GO:0007140	male meiotic nuclear division	IEP	HCCA
BP	GO:0007141	male meiosis I	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0007276	gamete generation	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
CC	GO:0008180	COP9 signalosome	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009640	photomorphogenesis	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
BP	GO:0010212	response to ionizing radiation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
BP	GO:0010387	COP9 signalosome assembly	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015936	coenzyme A metabolic process	IEP	HCCA
BP	GO:0015937	coenzyme A biosynthetic process	IEP	HCCA
BP	GO:0016032	viral process	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016444	somatic cell DNA recombination	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
CC	GO:0016607	nuclear speck	IEP	HCCA
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	HCCA
MF	GO:0016819	hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032504	multicellular organism reproduction	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	HCCA
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0032950	regulation of beta-glucan metabolic process	IEP	HCCA
BP	GO:0032951	regulation of beta-glucan biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0035825	homologous recombination	IEP	HCCA
BP	GO:0042138	meiotic DNA double-strand break formation	IEP	HCCA
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0044000	movement in host	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044766	multi-organism transport	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0046739	transport of virus in multicellular host	IEP	HCCA
BP	GO:0046794	transport of virus	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0047627	adenylylsulfatase activity	IEP	HCCA
BP	GO:0048232	male gamete generation	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	HCCA
BP	GO:0051026	chiasma assembly	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051701	biological process involved in interaction with host	IEP	HCCA
BP	GO:0051704	multi-organism process	IEP	HCCA
BP	GO:0052126	movement in host environment	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0061982	meiosis I cell cycle process	IEP	HCCA
BP	GO:0070726	cell wall assembly	IEP	HCCA
BP	GO:0071668	plant-type cell wall assembly	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
BP	GO:0140013	meiotic nuclear division	IEP	HCCA
BP	GO:0140527	reciprocal homologous recombination	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902579	multi-organism localization	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA
BP	GO:2001006	regulation of cellulose biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022617	Rad60/SUMO-like_dom	17	87

External Links

PLAZA 3.0 Dicots	AT5G55160

AT5G55160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation