AT5G55230

Description : microtubule-associated proteins 65-1

Gene families : OG_01_0000493 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G55230
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp8g01490.1	No alias	microtubule-associated protein (MAP65-2)	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_23910V3.1	No alias	microtubule-associated proteins 65-1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0000226	microtubule cytoskeleton organization	None	Extended
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0000272	polysaccharide catabolic process	RCA	Interproscan
BP	GO:0001578	microtubule bundle formation	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005819	spindle	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005874	microtubule	IDA	Interproscan
CC	GO:0005881	cytoplasmic microtubule	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	RCA	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007020	microtubule nucleation	IDA	Interproscan
BP	GO:0007020	microtubule nucleation	RCA	Interproscan
MF	GO:0008017	microtubule binding	IDA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	IGI	Interproscan
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
CC	GO:0009524	phragmoplast	IDA	Interproscan
CC	GO:0009574	preprophase band	IDA	Interproscan
BP	GO:0009664	plant-type cell wall organization	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010005	cortical microtubule, transverse to long axis	IDA	Interproscan
BP	GO:0010638	positive regulation of organelle organization	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022403	cell cycle phase	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	RCA	Interproscan
BP	GO:0030865	cortical cytoskeleton organization	None	Extended
BP	GO:0031109	microtubule polymerization or depolymerization	None	Extended
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031113	regulation of microtubule polymerization	None	Extended
BP	GO:0031116	positive regulation of microtubule polymerization	IDA	Interproscan
BP	GO:0031122	cytoplasmic microtubule organization	None	Extended
BP	GO:0031334	positive regulation of protein-containing complex assembly	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032273	positive regulation of protein polymerization	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032886	regulation of microtubule-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043622	cortical microtubule organization	IMP	Interproscan
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044848	biological phase	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046785	microtubule polymerization	IDA	Interproscan
MF	GO:0046983	protein dimerization activity	IPI	Interproscan
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0048364	root development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048528	post-embryonic root development	IGI	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051258	protein polymerization	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0051322	anaphase	IDA	Interproscan
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
CC	GO:0055028	cortical microtubule	IDA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070507	regulation of microtubule cytoskeleton organization	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0072686	mitotic spindle	IDA	Interproscan
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0000919	cell plate assembly	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	HCCA
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005828	kinetochore microtubule	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
CC	GO:0005971	ribonucleoside-diphosphate reductase complex	IEP	HCCA
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0006261	DNA-dependent DNA replication	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin assembly	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006471	protein ADP-ribosylation	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008422	beta-glucosidase activity	IEP	HCCA
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009200	deoxyribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009934	regulation of meristem structural organization	IEP	HCCA
BP	GO:0009956	radial pattern formation	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010031	circumnutation	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	HCCA
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	HCCA
BP	GO:0010364	regulation of ethylene biosynthetic process	IEP	HCCA
BP	GO:0010411	xyloglucan metabolic process	IEP	HCCA
BP	GO:0010480	microsporocyte differentiation	IEP	HCCA
BP	GO:0010540	basipetal auxin transport	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0015926	glucosidase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0016246	RNA interference	IEP	HCCA
BP	GO:0016441	posttranscriptional gene silencing	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	HCCA
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
BP	GO:0030036	actin cytoskeleton organization	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	HCCA
BP	GO:0031047	gene silencing by RNA	IEP	HCCA
BP	GO:0031050	dsRNA processing	IEP	HCCA
CC	GO:0031209	SCAR complex	IEP	HCCA
BP	GO:0031335	regulation of sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0031507	heterochromatin assembly	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032465	regulation of cytokinesis	IEP	HCCA
BP	GO:0032467	positive regulation of cytokinesis	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
MF	GO:0035064	methylated histone binding	IEP	HCCA
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	HCCA
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0042762	regulation of sulfur metabolic process	IEP	HCCA
MF	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0043621	protein self-association	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044347	cell wall polysaccharide catabolic process	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
CC	GO:0045298	tubulin complex	IEP	HCCA
BP	GO:0045493	xylan catabolic process	IEP	HCCA
BP	GO:0045787	positive regulation of cell cycle	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048533	sporocyte differentiation	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0050879	multicellular organismal movement	IEP	HCCA
MF	GO:0051011	microtubule minus-end binding	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0051781	positive regulation of cell division	IEP	HCCA
BP	GO:0060236	regulation of mitotic spindle organization	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	HCCA
MF	GO:0080176	xyloglucan 1,6-alpha-xylosidase activity	IEP	HCCA
BP	GO:0090068	positive regulation of cell cycle process	IEP	HCCA
BP	GO:0090224	regulation of spindle organization	IEP	HCCA
MF	GO:0097599	xylanase activity	IEP	HCCA
MF	GO:0140030	modification-dependent protein binding	IEP	HCCA
MF	GO:0140034	methylation-dependent protein binding	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
BP	GO:1900908	regulation of olefin metabolic process	IEP	HCCA
BP	GO:1900911	regulation of olefin biosynthetic process	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:2000694	regulation of phragmoplast microtubule organization	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT5G55230

AT5G55230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation