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  5. AT5G56370

AT5G56370


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G56370
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G05080 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55030 No alias RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10750 No alias FBD domain family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G12840 No alias unknown protein; Has 0 Blast hits to 0 proteins in 0... 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G26930 No alias Protein with RNI-like/FBD-like domains 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49040 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49045 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49480 No alias Protein with RNI-like/FBD-like domains 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G52690 No alias RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13965 No alias Protein with RNI-like/FBD-like domains 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G26340 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38570 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G40750 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G52460 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56325 No alias FBD-like domain family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56430 No alias F-box/FBD-like domains containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56440 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56452 No alias FBD-like domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032269 negative regulation of cellular protein metabolic process IEP HCCA
MF GO:0032451 demethylase activity IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
MF GO:0035514 DNA demethylase activity IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 151 175
IPR006566 FBD 335 380
IPR001810 F-box_dom 3 40
PLAZA 3.0 Dicots AT5G56370