AT5G57530

Description : xyloglucan endotransglucosylase/hydrolase 12

Gene families : OG_01_0000050 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G57530
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AT1G65310	No alias	xyloglucan endotransglucosylase/hydrolase 17	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G14620	No alias	xyloglucan endotransglucosylase/hydrolase 10	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13080	No alias	xyloglucan endotransglucosylase/hydrolase 1	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13090	No alias	xyloglucan endotransglucosylase/hydrolase 2	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G30290	No alias	xyloglucan endotransglucosylase/hydrolase 19	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g02380.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g17810.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g17820.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g10340.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g10370.1	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_10500V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_14940V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 7	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_600V3.1	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010054	trichoblast differentiation	RCA	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010411	xyloglucan metabolic process	IDA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	ISS	Interproscan
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005548	phospholipid transporter activity	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006829	zinc ion transport	IEP	HCCA
BP	GO:0007043	cell-cell junction assembly	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
MF	GO:0008526	phosphatidylinositol transfer activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009531	secondary cell wall	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0010466	negative regulation of peptidase activity	IEP	HCCA
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transport	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030162	regulation of proteolysis	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
CC	GO:0031225	anchored component of membrane	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0034329	cell junction assembly	IEP	HCCA
BP	GO:0034330	cell junction organization	IEP	HCCA
BP	GO:0035864	response to potassium ion	IEP	HCCA
BP	GO:0035865	cellular response to potassium ion	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0045216	cell-cell junction organization	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0045861	negative regulation of proteolysis	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
CC	GO:0048226	Casparian strip	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048766	root hair initiation	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0051346	negative regulation of hydrolase activity	IEP	HCCA
BP	GO:0052547	regulation of peptidase activity	IEP	HCCA
BP	GO:0052548	regulation of endopeptidase activity	IEP	HCCA
BP	GO:0055062	phosphate ion homeostasis	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0071365	cellular response to auxin stimulus	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	HCCA
BP	GO:0072732	cellular response to calcium ion starvation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA
MF	GO:0120014	phospholipid transfer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010713	XET_C	238	282
IPR000757	GH16	29	207

External Links

PLAZA 3.0 Dicots	AT5G57530

AT5G57530

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation