AT1G26670

Description : Vesicle transport v-SNARE family protein

Gene families : OG_01_0001270 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001270_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26670
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c11_5240V3.1	No alias	Vesicle transport v-SNARE family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	TAS	Interproscan
BP	GO:0000902	cell morphogenesis	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005483	soluble NSF attachment protein activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005770	late endosome	TAS	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	TAS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006623	protein targeting to vacuole	IMP	Interproscan
BP	GO:0006623	protein targeting to vacuole	RCA	Interproscan
BP	GO:0006625	protein targeting to peroxisome	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006869	lipid transport	RCA	Interproscan
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006891	intra-Golgi vesicle-mediated transport	RCA	Interproscan
BP	GO:0006891	intra-Golgi vesicle-mediated transport	TAS	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007031	peroxisome organization	None	Extended
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010351	lithium ion transport	RCA	Interproscan
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015919	peroxisomal membrane transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
BP	GO:0016197	endosomal transport	RCA	Interproscan
BP	GO:0016558	protein import into peroxisome matrix	RCA	Interproscan
BP	GO:0017038	protein import	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043574	peroxisomal transport	None	Extended
BP	GO:0044743	protein transmembrane import into intracellular organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	TAS	Interproscan
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072662	protein localization to peroxisome	None	Extended
BP	GO:0072663	establishment of protein localization to peroxisome	None	Extended
BP	GO:0072665	protein localization to vacuole	None	Extended
BP	GO:0072666	establishment of protein localization to vacuole	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004407	histone deacetylase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
MF	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005881	cytoplasmic microtubule	IEP	HCCA
BP	GO:0006464	cellular protein modification process	IEP	HCCA
BP	GO:0006476	protein deacetylation	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006638	neutral lipid metabolic process	IEP	HCCA
BP	GO:0006639	acylglycerol metabolic process	IEP	HCCA
BP	GO:0006641	triglyceride metabolic process	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010044	response to aluminum ion	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
BP	GO:0010350	cellular response to magnesium starvation	IEP	HCCA
BP	GO:0010555	response to mannitol	IEP	HCCA
BP	GO:0010639	negative regulation of organelle organization	IEP	HCCA
BP	GO:0016032	viral process	IEP	HCCA
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	HCCA
BP	GO:0016575	histone deacetylation	IEP	HCCA
BP	GO:0018008	N-terminal peptidyl-glycine N-myristoylation	IEP	HCCA
BP	GO:0018201	peptidyl-glycine modification	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	HCCA
MF	GO:0019213	deacetylase activity	IEP	HCCA
BP	GO:0019432	triglyceride biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031056	regulation of histone modification	IEP	HCCA
BP	GO:0031063	regulation of histone deacetylation	IEP	HCCA
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031111	negative regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031113	regulation of microtubule polymerization	IEP	HCCA
BP	GO:0031114	regulation of microtubule depolymerization	IEP	HCCA
BP	GO:0031115	negative regulation of microtubule polymerization	IEP	HCCA
BP	GO:0031117	positive regulation of microtubule depolymerization	IEP	HCCA
BP	GO:0031122	cytoplasmic microtubule organization	IEP	HCCA
BP	GO:0031333	negative regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032026	response to magnesium ion	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032272	negative regulation of protein polymerization	IEP	HCCA
BP	GO:0032886	regulation of microtubule-based process	IEP	HCCA
MF	GO:0033558	protein deacetylase activity	IEP	HCCA
BP	GO:0035601	protein deacylation	IEP	HCCA
BP	GO:0035864	response to potassium ion	IEP	HCCA
BP	GO:0035865	cellular response to potassium ion	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
MF	GO:0043325	phosphatidylinositol-3,4-bisphosphate binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043622	cortical microtubule organization	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044267	cellular protein metabolic process	IEP	HCCA
BP	GO:0044766	multi-organism transport	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0046460	neutral lipid biosynthetic process	IEP	HCCA
BP	GO:0046463	acylglycerol biosynthetic process	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
BP	GO:0046794	transport of virus	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048640	negative regulation of developmental growth	IEP	HCCA
BP	GO:0051129	negative regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051511	negative regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0051592	response to calcium ion	IEP	HCCA
BP	GO:0062197	cellular response to chemical stress	IEP	HCCA
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0071216	cellular response to biotic stimulus	IEP	HCCA
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	HCCA
BP	GO:0071241	cellular response to inorganic substance	IEP	HCCA
BP	GO:0071248	cellular response to metal ion	IEP	HCCA
BP	GO:0071280	cellular response to copper ion	IEP	HCCA
BP	GO:0071281	cellular response to iron ion	IEP	HCCA
BP	GO:0071286	cellular response to magnesium ion	IEP	HCCA
BP	GO:0071322	cellular response to carbohydrate stimulus	IEP	HCCA
BP	GO:0071325	cellular response to mannitol stimulus	IEP	HCCA
BP	GO:0071470	cellular response to osmotic stress	IEP	HCCA
BP	GO:0071472	cellular response to salt stress	IEP	HCCA
BP	GO:0072708	response to sorbitol	IEP	HCCA
BP	GO:0072709	cellular response to sorbitol	IEP	HCCA
BP	GO:0075733	intracellular transport of virus	IEP	HCCA
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	HCCA
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0080037	negative regulation of cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0090311	regulation of protein deacetylation	IEP	HCCA
BP	GO:0098732	macromolecule deacylation	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901881	positive regulation of protein depolymerization	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
BP	GO:1902579	multi-organism localization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902904	negative regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007705	Vesicle_trsprt_v-SNARE_N	12	91

External Links

PLAZA 3.0 Dicots	AT1G26670

AT1G26670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation