1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G62340

AT5G62340


Description : Plant invertase/pectin methylesterase inhibitor superfamily protein


Gene families : OG_01_0000412 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000412_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62340
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT1G14890 No alias Plant invertase/pectin methylesterase inhibitor... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62770 No alias Plant invertase/pectin methylesterase inhibitor... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G70720 No alias Plant invertase/pectin methylesterase inhibitor... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G25260 No alias Plant invertase/pectin methylesterase inhibitor... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0046910 pectinesterase inhibitor activity ISS Interproscan
BP GO:0048527 lateral root development RCA Interproscan
BP GO:0048589 developmental growth RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
MF GO:0003838 sterol 24-C-methyltransferase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004791 thioredoxin-disulfide reductase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008169 C-methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009513 etioplast IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010455 positive regulation of cell fate commitment IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042964 obsolete thioredoxin reduction IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048829 root cap development IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 38 196
PLAZA 3.0 Dicots AT5G62340