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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component
Gene families : OG_01_0000830 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000830_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre02.g075700 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02780 | No alias | Ribosomal protein L19e family protein | 0.11 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT3G16780 | No alias | Ribosomal protein L19e family protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp7g09050.1 | No alias | component RPL19 of LSU proteome component | 0.11 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c15_5130V3.1 | No alias | Ribosomal protein L19e family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c16_410V3.1 | No alias | Ribosomal protein L19e family protein | 0.11 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c18_14440V3.1 | No alias | Ribosomal protein L19e family protein | 0.12 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c21_11230V3.1 | No alias | Ribosomal protein L19e family protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c22_9980V3.1 | No alias | Ribosomal protein L19e family protein | 0.12 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c25_8800V3.1 | No alias | Ribosomal protein L19e family protein | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c9_14720V3.1 | No alias | Ribosomal protein L19e family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000196 | Ribosomal_L19/L19e | 4 | 146 |
| No external refs found! |