Coexpression cluster: Cluster_17 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043043 peptide biosynthetic process 46.67% (21/45) 6.08 0.0 0.0
GO:0003735 structural constituent of ribosome 46.67% (21/45) 6.11 0.0 0.0
GO:0006518 peptide metabolic process 46.67% (21/45) 6.05 0.0 0.0
GO:0043604 amide biosynthetic process 46.67% (21/45) 6.06 0.0 0.0
GO:0043603 cellular amide metabolic process 46.67% (21/45) 6.03 0.0 0.0
GO:0006412 translation 46.67% (21/45) 6.13 0.0 0.0
GO:0005198 structural molecule activity 46.67% (21/45) 6.0 0.0 0.0
GO:0005840 ribosome 44.44% (20/45) 6.1 0.0 0.0
GO:0043228 non-membrane-bounded organelle 44.44% (20/45) 5.91 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 44.44% (20/45) 5.91 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 46.67% (21/45) 5.48 0.0 0.0
GO:0009059 macromolecule biosynthetic process 46.67% (21/45) 5.35 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 46.67% (21/45) 5.2 0.0 0.0
GO:0043229 intracellular organelle 44.44% (20/45) 4.95 0.0 0.0
GO:0043226 organelle 44.44% (20/45) 4.94 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 46.67% (21/45) 4.53 0.0 0.0
GO:0044249 cellular biosynthetic process 46.67% (21/45) 4.14 0.0 0.0
GO:1901576 organic substance biosynthetic process 46.67% (21/45) 4.08 0.0 0.0
GO:0009058 biosynthetic process 46.67% (21/45) 3.95 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 46.67% (21/45) 3.66 0.0 0.0
GO:0005622 intracellular anatomical structure 26.67% (12/45) 5.78 0.0 0.0
GO:0044267 cellular protein metabolic process 48.89% (22/45) 3.33 0.0 0.0
GO:0019538 protein metabolic process 48.89% (22/45) 3.1 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 48.89% (22/45) 3.06 0.0 0.0
GO:0110165 cellular anatomical entity 46.67% (21/45) 3.12 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 48.89% (22/45) 2.85 0.0 0.0
GO:0005575 cellular_component 48.89% (22/45) 2.81 0.0 0.0
GO:0043170 macromolecule metabolic process 48.89% (22/45) 2.69 0.0 0.0
GO:0006807 nitrogen compound metabolic process 48.89% (22/45) 2.43 0.0 0.0
GO:0044237 cellular metabolic process 48.89% (22/45) 2.38 0.0 0.0
GO:0044238 primary metabolic process 48.89% (22/45) 2.3 0.0 0.0
GO:0071704 organic substance metabolic process 48.89% (22/45) 2.22 0.0 0.0
GO:0008152 metabolic process 48.89% (22/45) 2.09 0.0 0.0
GO:0009987 cellular process 51.11% (23/45) 2.0 0.0 0.0
GO:0008150 biological_process 51.11% (23/45) 1.67 0.0 0.0
GO:0003674 molecular_function 60.0% (27/45) 1.13 4e-06 1e-05
GO:0003723 RNA binding 11.11% (5/45) 3.75 3.4e-05 7.3e-05
GO:0019843 rRNA binding 4.44% (2/45) 6.82 0.000131 0.000272
GO:0008097 5S rRNA binding 2.22% (1/45) 8.62 0.002537 0.005138
GO:0015934 large ribosomal subunit 2.22% (1/45) 7.04 0.007591 0.014991
GO:0044391 ribosomal subunit 2.22% (1/45) 6.62 0.010108 0.019477
GO:0003676 nucleic acid binding 11.11% (5/45) 1.64 0.021188 0.039854
GO:0042254 ribosome biogenesis 2.22% (1/45) 5.16 0.027558 0.049479
GO:0022613 ribonucleoprotein complex biogenesis 2.22% (1/45) 5.16 0.027558 0.049479
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_53 0.063 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_64 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_91 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_122 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_134 0.264 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_207 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_212 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_16 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_47 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_63 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_115 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_9 0.061 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_141 0.316 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_48 0.066 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_53 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_58 0.154 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_115 0.126 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_191 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_202 0.217 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_211 0.068 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_246 0.067 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_271 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_285 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_14 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_56 0.032 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_69 0.107 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_96 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_98 0.056 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_102 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_129 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (45) (download table)

InterPro Domains

GO Terms

Family Terms