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  5. Cre02.g108450

Cre02.g108450


Description : Multiprotein-bridging factor 1a OS=Arabidopsis thaliana


Gene families : OG_01_0001339 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g108450
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT3G58680 No alias multiprotein bridging factor 1B 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g14540.1 No alias Multiprotein-bridging factor 1b OS=Arabidopsis thaliana... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g09050.1 No alias Multiprotein-bridging factor 1c OS=Arabidopsis thaliana... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_36750V3.1 No alias multiprotein bridging factor 1B 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 mature ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 88 135
IPR013729 MBF1_N 6 78
No external refs found!