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  5. AT1G29980

AT1G29980


Description : Protein of unknown function, DUF642


Gene families : OG_01_0001534 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G29980
Cluster HCCA: Cluster_263


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0004034 aldose 1-epimerase activity IEP HCCA
MF GO:0004422 hypoxanthine phosphoribosyltransferase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006166 purine ribonucleoside salvage IEP HCCA
BP GO:0006168 adenine salvage IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006178 guanine salvage IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
MF GO:0008381 mechanosensitive ion channel activity IEP HCCA
MF GO:0008476 protein-tyrosine sulfotransferase activity IEP HCCA
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009403 toxin biosynthetic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009700 indole phytoalexin biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010120 camalexin biosynthetic process IEP HCCA
MF GO:0010326 methionine-oxo-acid transaminase activity IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010358 leaf shaping IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP HCCA
MF GO:0010428 methyl-CpNpG binding IEP HCCA
MF GO:0010429 methyl-CpNpN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0019209 kinase activator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022622 root system development IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030295 protein kinase activator activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0031055 chromatin remodeling at centromere IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031445 regulation of heterochromatin assembly IEP HCCA
BP GO:0031453 positive regulation of heterochromatin assembly IEP HCCA
BP GO:0031497 chromatin assembly IEP HCCA
BP GO:0031508 pericentric heterochromatin assembly IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032263 GMP salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042278 purine nucleoside metabolic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042451 purine nucleoside biosynthetic process IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
BP GO:0043096 purine nucleobase salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0043174 nucleoside salvage IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046083 adenine metabolic process IEP HCCA
BP GO:0046084 adenine biosynthetic process IEP HCCA
BP GO:0046098 guanine metabolic process IEP HCCA
BP GO:0046099 guanine biosynthetic process IEP HCCA
BP GO:0046100 hypoxanthine metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0046128 purine ribonucleoside metabolic process IEP HCCA
BP GO:0046129 purine ribonucleoside biosynthetic process IEP HCCA
BP GO:0046217 indole phytoalexin metabolic process IEP HCCA
BP GO:0046218 indolalkylamine catabolic process IEP HCCA
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048826 cotyledon morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050982 detection of mechanical stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051457 maintenance of protein location in nucleus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0052314 phytoalexin metabolic process IEP HCCA
BP GO:0052315 phytoalexin biosynthetic process IEP HCCA
BP GO:0052317 camalexin metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
MF GO:0070546 L-phenylalanine aminotransferase activity IEP HCCA
MF GO:0070547 L-tyrosine aminotransferase activity IEP HCCA
MF GO:0070548 L-glutamine aminotransferase activity IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP HCCA
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0106130 purine phosphoribosyltransferase activity IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:0120261 regulation of heterochromatin organization IEP HCCA
BP GO:0120263 positive regulation of heterochromatin organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140462 pericentric heterochromatin organization IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
BP GO:1902275 regulation of chromatin organization IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905269 positive regulation of chromatin organization IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006946 DUF642 216 382
IPR006946 DUF642 39 204
PLAZA 3.0 Dicots AT1G29980