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  5. Cre02.g142146

Cre02.g142146


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein


Gene families : OG_01_0007006 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre02.g142146
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT4G35250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g06810.1 No alias HCF244 protein involved in PS-II assembly 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_8140V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04187.1 No alias protein involved in PS-II assembly (HCF244) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR008030 NmrA-like 56 277
No external refs found!