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  5. AT1G31370

AT1G31370


Description : Ubiquitin-specific protease family C19-related protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31370
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G31380 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31400 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G01790 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05410 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05420 No alias TRAF-like family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42455 No alias No description available 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42460 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42465 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42470 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42475 No alias No description available 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42480 No alias TRAF-like family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44805 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58210 No alias TRAF-like family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58240 No alias TRAF-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58260 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58290 No alias TRAF-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58330 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58340 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58360 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58370 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58400 No alias TRAF-like family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58420 No alias TRAF-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58440 No alias TRAF-like superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006266 DNA ligation IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045947 negative regulation of translational initiation IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0090351 seedling development IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G31370