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  5. AT1G32050

AT1G32050


Description : SCAMP family protein


Gene families : OG_01_0000835 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G32050
Cluster HCCA: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
Cre02.g089900 No alias Secretory carrier-associated membrane protein 5 OS=Oryza... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_8700V3.1 No alias secretory carrier 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_14240V3.1 No alias secretory carrier 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
MF GO:0022857 transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000913 preprophase band assembly IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005623 obsolete cell IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006513 protein monoubiquitination IEP HCCA
BP GO:0006900 vesicle budding from membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009903 chloroplast avoidance movement IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
CC GO:0030863 cortical cytoskeleton IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0030981 cortical microtubule cytoskeleton IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR007273 SCAMP 92 262
PLAZA 3.0 Dicots AT1G32050