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  5. Cre06.g267600

Cre06.g267600


Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-e lycopene epsilon cyclase


Gene families : OG_01_0004430 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g267600
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT5G57030 No alias Lycopene beta/epsilon cyclase protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g05820.1 No alias lycopene epsilon cyclase (LCY-e) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_14590V3.1 No alias Lycopene beta/epsilon cyclase protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_15320V3.1 No alias Lycopene beta/epsilon cyclase protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12915.1 No alias no annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA

No InterPro domains available for this sequence

No external refs found!