Coexpression cluster: Cluster_103 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043436 oxoacid metabolic process 7.66% (18/235) 3.6 0.0 0.0
GO:0006082 organic acid metabolic process 7.66% (18/235) 3.6 0.0 0.0
GO:0019752 carboxylic acid metabolic process 7.66% (18/235) 3.61 0.0 0.0
GO:0006520 cellular amino acid metabolic process 5.53% (13/235) 3.83 0.0 0.0
GO:0043039 tRNA aminoacylation 3.83% (9/235) 4.5 0.0 0.0
GO:0043038 amino acid activation 3.83% (9/235) 4.5 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 3.83% (9/235) 4.45 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.83% (9/235) 4.45 0.0 0.0
GO:0016874 ligase activity 5.11% (12/235) 3.58 0.0 0.0
GO:0003674 molecular_function 45.53% (107/235) 0.73 0.0 0.0
GO:0044281 small molecule metabolic process 8.51% (20/235) 2.3 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 3.83% (9/235) 3.71 0.0 1e-06
GO:0006399 tRNA metabolic process 3.83% (9/235) 3.5 0.0 3e-06
GO:0036094 small molecule binding 15.74% (37/235) 1.38 0.0 3e-06
GO:0097159 organic cyclic compound binding 20.43% (48/235) 1.13 0.0 4e-06
GO:1901363 heterocyclic compound binding 20.43% (48/235) 1.13 0.0 4e-06
GO:0043168 anion binding 14.89% (35/235) 1.37 0.0 6e-06
GO:0006418 tRNA aminoacylation for protein translation 2.55% (6/235) 4.3 0.0 1e-05
GO:0034660 ncRNA metabolic process 3.83% (9/235) 3.09 1e-06 2.4e-05
GO:0005488 binding 27.66% (65/235) 0.84 1e-06 2.4e-05
GO:0003824 catalytic activity 25.96% (61/235) 0.83 3e-06 6.2e-05
GO:0016887 ATP hydrolysis activity 3.4% (8/235) 3.13 4e-06 6.6e-05
GO:0006457 protein folding 2.13% (5/235) 4.31 4e-06 7e-05
GO:0017111 nucleoside-triphosphatase activity 4.26% (10/235) 2.64 5e-06 8.2e-05
GO:1901265 nucleoside phosphate binding 13.62% (32/235) 1.24 5e-06 8.7e-05
GO:0000166 nucleotide binding 13.62% (32/235) 1.24 5e-06 8.7e-05
GO:0043167 ion binding 16.6% (39/235) 1.09 6e-06 8.8e-05
GO:0016462 pyrophosphatase activity 4.26% (10/235) 2.54 9e-06 0.000134
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.26% (10/235) 2.52 1e-05 0.000148
GO:0016817 hydrolase activity, acting on acid anhydrides 4.26% (10/235) 2.5 1.1e-05 0.000153
GO:0140098 catalytic activity, acting on RNA 3.83% (9/235) 2.67 1.3e-05 0.000166
GO:0016053 organic acid biosynthetic process 2.55% (6/235) 3.5 1.3e-05 0.000171
GO:0017076 purine nucleotide binding 12.34% (29/235) 1.23 1.7e-05 0.000212
GO:0044283 small molecule biosynthetic process 2.98% (7/235) 3.02 2.4e-05 0.000287
GO:0035639 purine ribonucleoside triphosphate binding 11.91% (28/235) 1.19 3.9e-05 0.000461
GO:0032555 purine ribonucleotide binding 11.91% (28/235) 1.19 4.2e-05 0.000484
GO:0032553 ribonucleotide binding 11.91% (28/235) 1.17 5.2e-05 0.000578
GO:0070279 vitamin B6 binding 2.13% (5/235) 3.56 5.9e-05 0.000604
GO:0030170 pyridoxal phosphate binding 2.13% (5/235) 3.56 5.9e-05 0.000604
GO:0008150 biological_process 25.96% (61/235) 0.7 6.1e-05 0.000609
GO:0097367 carbohydrate derivative binding 11.91% (28/235) 1.16 5.7e-05 0.000618
GO:0008610 lipid biosynthetic process 2.55% (6/235) 3.07 7.7e-05 0.000753
GO:0046394 carboxylic acid biosynthetic process 2.13% (5/235) 3.39 0.000105 0.001007
GO:0032787 monocarboxylic acid metabolic process 2.13% (5/235) 3.31 0.000137 0.001283
GO:0008135 translation factor activity, RNA binding 1.7% (4/235) 3.85 0.00015 0.001316
GO:0090079 translation regulator activity, nucleic acid binding 1.7% (4/235) 3.85 0.00015 0.001316
GO:0045182 translation regulator activity 1.7% (4/235) 3.85 0.00015 0.001316
GO:0019842 vitamin binding 2.13% (5/235) 3.27 0.000156 0.001334
GO:0140640 catalytic activity, acting on a nucleic acid 3.83% (9/235) 2.1 0.000262 0.002108
GO:0030554 adenyl nucleotide binding 10.21% (24/235) 1.14 0.000252 0.002112
GO:0006633 fatty acid biosynthetic process 1.28% (3/235) 4.5 0.000257 0.002113
GO:0009058 biosynthetic process 7.66% (18/235) 1.34 0.00029 0.002288
GO:0055114 obsolete oxidation-reduction process 6.38% (15/235) 1.49 0.000318 0.002464
GO:0072330 monocarboxylic acid biosynthetic process 1.28% (3/235) 4.24 0.000462 0.003517
GO:0006721 terpenoid metabolic process 0.85% (2/235) 5.65 0.00052 0.003813
GO:0016114 terpenoid biosynthetic process 0.85% (2/235) 5.65 0.00052 0.003813
GO:0005524 ATP binding 9.79% (23/235) 1.09 0.000545 0.003933
GO:0032559 adenyl ribonucleotide binding 9.79% (23/235) 1.08 0.000583 0.004133
GO:0003723 RNA binding 3.4% (8/235) 2.04 0.000773 0.005386
GO:0000287 magnesium ion binding 1.28% (3/235) 3.92 0.000928 0.006357
GO:0044255 cellular lipid metabolic process 2.13% (5/235) 2.7 0.001011 0.006814
GO:0009987 cellular process 20.0% (47/235) 0.64 0.001186 0.007864
GO:0006631 fatty acid metabolic process 1.28% (3/235) 3.74 0.00136 0.008874
GO:0016491 oxidoreductase activity 5.96% (14/235) 1.31 0.001658 0.010645
GO:0016070 RNA metabolic process 3.83% (9/235) 1.69 0.001988 0.012379
GO:0006629 lipid metabolic process 2.98% (7/235) 1.99 0.001984 0.012543
GO:0030955 potassium ion binding 0.85% (2/235) 4.65 0.00253 0.013506
GO:0008308 voltage-gated anion channel activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0005247 voltage-gated chloride channel activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0006821 chloride transport 0.85% (2/235) 4.65 0.00253 0.013506
GO:0005254 chloride channel activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0022832 voltage-gated channel activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0005253 anion channel activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0031420 alkali metal ion binding 0.85% (2/235) 4.65 0.00253 0.013506
GO:0004743 pyruvate kinase activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0005244 voltage-gated ion channel activity 0.85% (2/235) 4.65 0.00253 0.013506
GO:0008152 metabolic process 17.87% (42/235) 0.64 0.002275 0.013953
GO:0045454 cell redox homeostasis 1.7% (4/235) 2.59 0.004289 0.0226
GO:0006720 isoprenoid metabolic process 0.85% (2/235) 4.24 0.004641 0.023845
GO:0008299 isoprenoid biosynthetic process 0.85% (2/235) 4.24 0.004641 0.023845
GO:0019725 cellular homeostasis 1.7% (4/235) 2.54 0.004939 0.025062
GO:0042592 homeostatic process 1.7% (4/235) 2.51 0.005288 0.026185
GO:0046483 heterocycle metabolic process 6.38% (15/235) 1.08 0.005258 0.026354
GO:0065008 regulation of biological quality 1.7% (4/235) 2.46 0.006034 0.029176
GO:1901576 organic substance biosynthetic process 5.96% (14/235) 1.11 0.005997 0.029344
GO:1901360 organic cyclic compound metabolic process 6.38% (15/235) 1.05 0.006514 0.03113
GO:0022857 transmembrane transporter activity 3.83% (9/235) 1.43 0.00674 0.031839
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 0.85% (2/235) 3.92 0.00733 0.034236
GO:0005215 transporter activity 3.83% (9/235) 1.39 0.007995 0.03692
GO:0006413 translational initiation 0.85% (2/235) 3.78 0.008881 0.040559
GO:0004834 tryptophan synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0051247 positive regulation of protein metabolic process 0.43% (1/235) 6.24 0.013246 0.042868
GO:0051130 positive regulation of cellular component organization 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004325 ferrochelatase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0045905 positive regulation of translational termination 0.43% (1/235) 6.24 0.013246 0.042868
GO:0045901 positive regulation of translational elongation 0.43% (1/235) 6.24 0.013246 0.042868
GO:0045727 positive regulation of translation 0.43% (1/235) 6.24 0.013246 0.042868
GO:0043244 regulation of protein-containing complex disassembly 0.43% (1/235) 6.24 0.013246 0.042868
GO:0031369 translation initiation factor binding 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004312 fatty acid synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 0.43% (1/235) 6.24 0.013246 0.042868
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0009317 acetyl-CoA carboxylase complex 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004455 ketol-acid reductoisomerase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0003879 ATP phosphoribosyltransferase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0006426 glycyl-tRNA aminoacylation 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004820 glycine-tRNA ligase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0043243 positive regulation of protein-containing complex disassembly 0.43% (1/235) 6.24 0.013246 0.042868
GO:0034250 positive regulation of cellular amide metabolic process 0.43% (1/235) 6.24 0.013246 0.042868
GO:0070402 NADPH binding 0.43% (1/235) 6.24 0.013246 0.042868
GO:0006452 translational frameshifting 0.43% (1/235) 6.24 0.013246 0.042868
GO:0006449 regulation of translational termination 0.43% (1/235) 6.24 0.013246 0.042868
GO:0006448 regulation of translational elongation 0.43% (1/235) 6.24 0.013246 0.042868
GO:0010608 posttranscriptional regulation of gene expression 0.43% (1/235) 6.24 0.013246 0.042868
GO:0006417 regulation of translation 0.43% (1/235) 6.24 0.013246 0.042868
GO:0010628 positive regulation of gene expression 0.43% (1/235) 6.24 0.013246 0.042868
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0004019 adenylosuccinate synthase activity 0.43% (1/235) 6.24 0.013246 0.042868
GO:0034248 regulation of cellular amide metabolic process 0.43% (1/235) 6.24 0.013246 0.042868
GO:0032270 positive regulation of cellular protein metabolic process 0.43% (1/235) 6.24 0.013246 0.042868
GO:0034641 cellular nitrogen compound metabolic process 6.81% (16/235) 0.88 0.014381 0.045817
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 1.28% (3/235) 2.74 0.010146 0.045826
GO:0044249 cellular biosynthetic process 5.53% (13/235) 1.06 0.010285 0.045949
GO:0003743 translation initiation factor activity 0.85% (2/235) 3.43 0.014316 0.045968
GO:0019001 guanyl nucleotide binding 2.13% (5/235) 1.79 0.015006 0.046725
GO:0005525 GTP binding 2.13% (5/235) 1.79 0.015006 0.046725
GO:0032561 guanyl ribonucleotide binding 2.13% (5/235) 1.79 0.015006 0.046725
GO:0005737 cytoplasm 1.28% (3/235) 2.5 0.015811 0.048494
GO:0006163 purine nucleotide metabolic process 1.28% (3/235) 2.5 0.015811 0.048494
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_31 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_32 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_34 0.027 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_43 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_48 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_69 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_102 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_106 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_135 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_149 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_151 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.043 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_227 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_239 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_23 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_61 0.035 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_63 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_74 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_77 0.053 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_84 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_112 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_132 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_147 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_7 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_54 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_69 0.039 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_99 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_118 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_120 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_170 0.056 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_177 0.042 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_193 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_240 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_247 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_267 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_278 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_66 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_68 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_72 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_90 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_127 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_136 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_138 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_168 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_174 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_178 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_179 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (235) (download table)

InterPro Domains

GO Terms

Family Terms