Cre06.g273700


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein


Gene families : OG_01_0004500 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004500_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g273700
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT5G23120 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g23900.1 No alias HCF136 protein involved in PS-II assembly 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_7930V3.1 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11049.1 No alias protein involved in PS-II assembly (HCF136) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006576 cellular biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0042401 cellular biogenic amine biosynthetic process IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 76 398
No external refs found!