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  5. Cre06.g298300

Cre06.g298300


Description : Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0002431 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre06.g298300
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT4G34830 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 270 446
IPR002885 Pentatricopeptide_repeat 475 533
IPR002885 Pentatricopeptide_repeat 544 589
No external refs found!