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No description available
Gene families : OG_01_0004844 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004844_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre07.g324000 | |
| Cluster | HCCA: Cluster_76 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G33410 | No alias | SUPPRESSOR OF AUXIN RESISTANCE1 | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp8g11350.1 | No alias | NUP160 scaffold nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c11_26590V3.1 | No alias | SUPPRESSOR OF AUXIN RESISTANCE1 | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_01440.1 | No alias | scaffold nucleoporin of nuclear pore complex (NUP160) | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016421 | CoA carboxylase activity | IEP | HCCA |
| BP | GO:0016556 | mRNA modification | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0080009 | mRNA methylation | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |