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  5. Cre09.g396213

Cre09.g396213


Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO


Gene families : OG_01_0002117 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g396213
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT3G50820 No alias photosystem II subunit O-2 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G66570 No alias PS II oxygen-evolving complex 1 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g15300.1 No alias component PsbO/OEC33 of PS-II oxygen-evolving center 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_21050V3.1 No alias photosystem II subunit O-2 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_3620V3.1 No alias photosystem II subunit O-2 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_14080V3.1 No alias photosystem II subunit O-2 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_23170V3.1 No alias photosystem II subunit O-2 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08643.1 No alias component PsbO/OEC33 of PS-II oxygen-evolving center 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
MF GO:0010242 oxygen evolving activity IEA Interproscan
BP GO:0042549 photosystem II stabilization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR002628 PSII_MSP 59 290
No external refs found!