Coexpression cluster: Cluster_27 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 12.5% (14/112) 6.31 0.0 0.0
GO:0015979 photosynthesis 12.5% (14/112) 6.21 0.0 0.0
GO:0009522 photosystem I 8.04% (9/112) 7.31 0.0 0.0
GO:0098796 membrane protein complex 13.39% (15/112) 4.71 0.0 0.0
GO:0009538 photosystem I reaction center 4.46% (5/112) 7.31 0.0 0.0
GO:0032991 protein-containing complex 14.29% (16/112) 2.89 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 4.46% (5/112) 5.54 0.0 1e-06
GO:0009523 photosystem II 4.46% (5/112) 5.38 0.0 2e-06
GO:1990204 oxidoreductase complex 4.46% (5/112) 5.17 0.0 3e-06
GO:0009055 electron transfer activity 3.57% (4/112) 4.26 5.3e-05 0.000701
GO:0019898 extrinsic component of membrane 2.68% (3/112) 5.09 8.5e-05 0.001009
GO:1902494 catalytic complex 4.46% (5/112) 3.44 9.8e-05 0.001068
GO:0004683 calmodulin-dependent protein kinase activity 1.79% (2/112) 6.72 0.000118 0.001189
GO:0010207 photosystem II assembly 1.79% (2/112) 5.99 0.00039 0.003651
GO:0005516 calmodulin binding 1.79% (2/112) 5.72 0.000583 0.004772
GO:0034622 cellular protein-containing complex assembly 2.68% (3/112) 4.19 0.000573 0.005003
GO:0004674 protein serine/threonine kinase activity 1.79% (2/112) 5.31 0.001079 0.007852
GO:0065003 protein-containing complex assembly 2.68% (3/112) 3.89 0.001063 0.008192
GO:0043933 protein-containing complex subunit organization 2.68% (3/112) 3.68 0.001628 0.011223
GO:0005575 cellular_component 15.18% (17/112) 1.12 0.001953 0.01279
GO:0022607 cellular component assembly 2.68% (3/112) 3.4 0.002866 0.017878
GO:0034357 photosynthetic membrane 0.89% (1/112) 7.31 0.006313 0.025844
GO:0043467 regulation of generation of precursor metabolites and energy 0.89% (1/112) 7.31 0.006313 0.025844
GO:0042548 regulation of photosynthesis, light reaction 0.89% (1/112) 7.31 0.006313 0.025844
GO:0042549 photosystem II stabilization 0.89% (1/112) 7.31 0.006313 0.025844
GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity 0.89% (1/112) 7.31 0.006313 0.025844
GO:0010242 oxygen evolving activity 0.89% (1/112) 7.31 0.006313 0.025844
GO:0010109 regulation of photosynthesis 0.89% (1/112) 7.31 0.006313 0.025844
GO:0042651 thylakoid membrane 0.89% (1/112) 7.31 0.006313 0.025844
GO:0051540 metal cluster binding 2.68% (3/112) 3.14 0.004808 0.027385
GO:0051536 iron-sulfur cluster binding 2.68% (3/112) 3.14 0.004808 0.027385
GO:0016491 oxidoreductase activity 7.14% (8/112) 1.58 0.005531 0.030188
GO:0009512 cytochrome b6f complex 0.89% (1/112) 6.31 0.012587 0.04711
GO:0004425 indole-3-glycerol-phosphate synthase activity 0.89% (1/112) 6.31 0.012587 0.04711
GO:0017004 cytochrome complex assembly 0.89% (1/112) 6.31 0.012587 0.04711
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_86 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_98 0.058 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_106 0.152 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_135 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_185 0.044 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_239 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_24 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_157 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_7 0.051 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_11 0.119 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_77 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_103 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_111 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_149 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_163 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_24 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_51 0.053 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_63 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_68 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_96 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_103 0.118 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_171 0.175 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_189 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_231 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_256 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_284 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_4 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_38 0.081 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_118 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_137 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_178 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_180 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (112) (download table)

InterPro Domains

GO Terms

Family Terms