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  5. Cre10.g420100

Cre10.g420100


Description : DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000507 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g420100
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT2G20560 No alias DNAJ heat shock family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g10560.1 No alias co-chaperone (Hsp40) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_2810V3.1 No alias DNAJ heat shock family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_3820V3.1 No alias DNAJ heat shock family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_2260V3.1 No alias DNAJ heat shock family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 4 67
IPR002939 DnaJ_C 170 323
No external refs found!