AT1G04630

Description : GRIM-19 protein

Gene families : OG_01_0004517 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004517_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04630
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
Mp1g17500.1	No alias	component NDUFA13 of NADH dehydrogenase alpha subcomplex	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_2570V3.1	No alias	GRIM-19 protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_4240V3.1	No alias	GRIM-19 protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005747	mitochondrial respiratory chain complex I	IDA	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009853	photorespiration	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	IDA	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045271	respiratory chain complex I	IDA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0004395	hexaprenyldihydroxybenzoate methyltransferase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
CC	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006120	mitochondrial electron transport, NADH to ubiquinone	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006743	ubiquinone metabolic process	IEP	HCCA
BP	GO:0006744	ubiquinone biosynthetic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010420	3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
BP	GO:0034622	cellular protein-containing complex assembly	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0035966	response to topologically incorrect protein	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0043603	cellular amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex subunit organization	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0045257	succinate dehydrogenase complex (ubiquinone)	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
CC	GO:0045281	succinate dehydrogenase complex	IEP	HCCA
CC	GO:0045283	fumarate reductase complex	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	HCCA
BP	GO:0051788	response to misfolded protein	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0080129	proteasome core complex assembly	IEP	HCCA
BP	GO:0090506	axillary shoot meristem initiation	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA
BP	GO:1905428	regulation of plant organ formation	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA
BP	GO:2000032	regulation of secondary shoot formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009346	GRIM-19	20	138

External Links

PLAZA 3.0 Dicots	AT1G04630

AT1G04630

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation