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  5. Cre10.g452050

Cre10.g452050


Description : Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa4-type component


Gene families : OG_01_0000685 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000685_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g452050
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G19150 No alias photosystem I light harvesting complex gene 6 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G61470 No alias photosystem I light harvesting complex gene 2 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G28450 No alias Chlorophyll A-B binding family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g13180.1 No alias component LHCa2 of LHC-I complex 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_25360V3.1 No alias photosystem I light harvesting complex gene 2 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_25415V3.1 No alias photosystem I light harvesting complex gene 2 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_25450V3.1 No alias photosystem I light harvesting complex gene 2 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_19200V3.1 No alias photosystem I light harvesting complex gene 2 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_23240V3.1 No alias photosystem I light harvesting complex gene 2 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13084.1 No alias component LHCa2 of LHC-I complex 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 68 233
No external refs found!