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  5. Cre12.g486300

Cre12.g486300


Description : Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaL


Gene families : OG_01_0003266 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g486300
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT4G12800 No alias photosystem I subunit l 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g18150.1 No alias component PsaL of PS-I complex 0.21 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_5670V3.1 No alias photosystem I subunit l 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_2310V3.1 No alias photosystem I subunit l 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_4200V3.1 No alias photosystem I subunit l 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03607.1 No alias component PsaL of PS-I complex 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003757 PSI_PsaL 43 191
No external refs found!