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  5. AT1G48800

AT1G48800


Description : Terpenoid cyclases/Protein prenyltransferases superfamily protein


Gene families : OG_01_0000165 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G48800
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AT1G31950 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25820 No alias terpene synthase-like sequence-1,8-cineole 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G25830 No alias terpene synthase-like sequence-1,8-cineole 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G32030 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G16740 No alias terpene synthase 03 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 73 250
IPR005630 Terpene_synthase_metal-bd 281 548
PLAZA 3.0 Dicots AT1G48800