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  5. Cre12.g500900

Cre12.g500900


Description : Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (SIZ1)


Gene families : OG_01_0001775 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001775_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g500900
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_14153V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_11400V3.1 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 173 225
IPR004181 Znf_MIZ 412 456
No external refs found!