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  5. Cre12.g534800

Cre12.g534800


Description : Photosynthesis.photorespiration.glycine cleavage system.P-protein glycine dehydrogenase component


Gene families : OG_01_0002587 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g534800
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Mp7g08890.1 No alias glycine dehydrogenase component P-protein of glycine... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_4520V3.1 No alias glycine decarboxylase P-protein 1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_4550V3.1 No alias glycine decarboxylase P-protein 1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_5030V3.1 No alias glycine decarboxylase P-protein 2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07724.1 No alias glycine dehydrogenase component P-protein of glycine... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEA Interproscan
BP GO:0006546 glycine catabolic process IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008818 cobalamin 5'-phosphate synthase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009235 cobalamin metabolic process IEP HCCA
BP GO:0009236 cobalamin biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR020581 GDC_P 549 802
IPR020581 GDC_P 83 510
No external refs found!