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Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL17 component
Gene families : OG_01_0001549 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001549_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre13.g568900 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G27400 | No alias | Ribosomal protein L22p/L17e family protein | 0.38 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G67430 | No alias | Ribosomal protein L22p/L17e family protein | 0.32 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp1g10230.1 | No alias | component RPL17 of LSU proteome component | 0.3 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c11_5840V3.1 | No alias | Ribosomal protein L22p/L17e family protein | 0.53 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c1_6650V3.1 | No alias | Ribosomal protein L22p/L17e family protein | 0.29 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_29840V3.1 | No alias | Ribosomal protein L22p/L17e family protein | 0.5 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c7_25220V3.1 | No alias | Ribosomal protein L22p/L17e family protein | 0.17 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c7_25240V3.1 | No alias | Ribosomal protein L22p/L17e family protein | 0.54 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_00364.1 | No alias | component uL22 of LSU proteome component | 0.28 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001063 | Ribosomal_L22 | 17 | 152 |
| No external refs found! |