1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre13.g589300

Cre13.g589300


Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I complex.CAP-H component


Gene families : OG_01_0002233 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002233_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g589300
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT2G32590 No alias LOCATED IN: chloroplast; EXPRESSED IN: 17 plant... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g27450.1 No alias component CAP-H of condensin I complex 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_22430V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07988.2 No alias component CAP-H of condensin I complex 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07988.3 No alias component CAP-H of condensin I complex 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEA Interproscan
BP GO:0007076 mitotic chromosome condensation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000444 MIS12/MIND type complex IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
CC GO:0000818 nuclear MIS12/MIND complex IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022816 Condensin_barren_su2 61 856
No external refs found!