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  5. AT1G51320

AT1G51320


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000237 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G51320
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G32430 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47390 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G51290 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G58090 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G59630 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G14710 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16580 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16590 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59590 No alias jacalin lectin family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G37040 No alias F-box family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 190 362
IPR001810 F-box_dom 5 43
PLAZA 3.0 Dicots AT1G51320