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Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BDP1 component
Gene families : OG_01_0005340 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005340_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre15.g640800 | |
| Cluster | HCCA: Cluster_164 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Zci_08049.1 | No alias | component BDP1 of TFIIIb transcription factor complex | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0022406 | membrane docking | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0048278 | vesicle docking | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0051640 | organelle localization | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140029 | exocytic process | IEP | HCCA |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR039467 | TFIIIB_B''_Myb | 1816 | 1877 |
| No external refs found! |