1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre16.g673650

Cre16.g673650


Description : Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb5-type component


Gene families : OG_01_0002709 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002709_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g673650
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT4G10340 No alias light harvesting complex of photosystem II 5 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g10900.1 No alias component LHCb5 of LHC-II complex 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_12230V3.1 No alias light harvesting complex of photosystem II 5 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_12240V3.1 No alias light harvesting complex of photosystem II 5 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_28370V3.1 No alias light harvesting complex of photosystem II 5 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00732.1 No alias component LHCb5 of LHC-II complex 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 72 253
No external refs found!