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AT1G52830


Description : indole-3-acetic acid 6


Gene families : OG_01_0000170 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52830
Cluster HCCA: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AT1G04550 No alias AUX/IAA transcriptional regulator family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G15580 No alias indole-3-acetic acid inducible 5 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G15540 No alias indole-3-acetic acid inducible 19 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G16500 No alias phytochrome-associated protein 1 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009704 de-etiolation IMP Interproscan
BP GO:0009733 response to auxin IMP Interproscan
BP GO:0009733 response to auxin IEP Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034249 negative regulation of cellular amide metabolic process IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0045947 negative regulation of translational initiation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071497 cellular response to freezing IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 31 184
PLAZA 3.0 Dicots AT1G52830