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AT1G54140


Description : TATA binding protein associated factor 21kDa subunit


Gene families : OG_01_0006921 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54140
Cluster HCCA: Cluster_152


Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005669 transcription factor TFIID complex ISS Interproscan
BP GO:0006352 DNA-templated transcription, initiation ISS Interproscan
BP GO:0006366 transcription by RNA polymerase II RCA Interproscan
BP GO:0009560 embryo sac egg cell differentiation RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005845 mRNA cap binding complex IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0031053 primary miRNA processing IEP HCCA
CC GO:0034518 RNA cap binding complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003162 TFIID-31 7 126
PLAZA 3.0 Dicots AT1G54140