Mp1g00160.1


Description : Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana (sp|q9lu85|pap4_arath : 152.0)


Gene families : OG_01_0003516 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003516_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g00160.1
Cluster HCCA: Cluster_61


Cluster_134 vs Cluster_171 graph comparison<table class="table table-striped table-fixed" id="go_table"><thead><tr><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span> Type</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th><th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th></tr></thead><tbody><tr><td class="col-xs-12"><p>No GO annotation available for this sequence</p></td></tr></tbody></table></div><div class="panel-body"><a href="#" id="go_toggle">Toggle parental</a></div></div><div class="tab-pane fade" id="tab2default"><div class="table-responsive"><table class="table table-striped table-fixed" id="predicted_go_table"><thead><tr><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th><th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th></tr></thead><tbody><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/35" data-toggle="tooltip" data-placement="top" title=""The directed movement of transition metal ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver." [ISBN:0198506732]">GO:0000041</a></td><td class="col-xs-6">transition metal ion transport</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/4053" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of iron (Fe) ions from one side of a membrane to the other." [GOC:ai]">GO:0005381</a></td><td class="col-xs-6">iron ion transmembrane transporter activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/5198" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving isoprenoid compounds, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues." [ISBN:0198547684]">GO:0006720</a></td><td class="col-xs-6">isoprenoid metabolic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/5199" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure and including derivatives with various functional groups." [ISBN:0198506732]">GO:0006721</a></td><td class="col-xs-6">terpenoid metabolic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/5234" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems." [GOC:ai]">GO:0006766</a></td><td class="col-xs-6">vitamin metabolic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/5235" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving any of a diverse group of vitamins that are soluble in water." [GOC:jl]">GO:0006767</a></td><td class="col-xs-6">water-soluble vitamin metabolic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/5238" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD)." [GOC:jl, http://www.indstate.edu/thcme/mwking/vitamins.html]">GO:0006771</a></td><td class="col-xs-6">riboflavin metabolic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/5289" data-toggle="tooltip" data-placement="top" title=""The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:ai]">GO:0006826</a></td><td class="col-xs-6">iron ion transport</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/6273" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues." [ISBN:0198506732]">GO:0008299</a></td><td class="col-xs-6">isoprenoid biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">CC</td><td class="col-xs-2"><a href="/go/view/6277" data-toggle="tooltip" data-placement="top" title=""A protein complex that contains one or more cysteine-type endopeptidases (also called caspases), which give the complex a peptidase activity with specificity for the hydrolysis of aspartyl bonds. These complexes may be involved e.g. in apoptotic or inflammation processes." [GOC:cna, GOC:mtg_apoptosis, PMID:15569692]">GO:0008303</a></td><td class="col-xs-6">caspase complex</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/6597" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP." [EC:4.6.1.12, RHEA:23864]">GO:0008685</a></td><td class="col-xs-6">2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/6612" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP(+) = 5-amino-6-(5-phosphoribosylamino)uracil + H(+) + NADPH." [EC:1.1.1.193, RHEA:17845]">GO:0008703</a></td><td class="col-xs-6">5-amino-6-(5-phosphoribosylamino)uracil reductase activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/6989" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body." [GOC:go_curators, ISBN:0198506732]">GO:0009110</a></td><td class="col-xs-6">vitamin biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/7107" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD)." [GOC:jl, http://www.indstate.edu/thcme/mwking/vitamins.html]">GO:0009231</a></td><td class="col-xs-6">riboflavin biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/9970" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure." [GOC:ai]">GO:0016114</a></td><td class="col-xs-6">terpenoid biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/10087" data-toggle="tooltip" data-placement="top" title=""A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain." [ISBN:0879695595]">GO:0016255</a></td><td class="col-xs-6">attachment of GPI anchor to protein</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/10364" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor." [GOC:ai]">GO:0016614</a></td><td class="col-xs-6">oxidoreductase activity, acting on CH-OH group of donors</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/10366" data-toggle="tooltip" data-placement="top" title=""Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP." [EC:1.1.1.-, GOC:ai]">GO:0016616</a></td><td class="col-xs-6">oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/10579" data-toggle="tooltip" data-placement="top" title=""Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond." [GOC:jl]">GO:0016849</a></td><td class="col-xs-6">phosphorus-oxygen lyase activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/10584" data-toggle="tooltip" data-placement="top" title=""Catalysis of a reaction that alters the configuration of one or more chiral centers in a molecule." [GOC:mah, ISBN:0198506732]">GO:0016854</a></td><td class="col-xs-6">racemase and epimerase activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/10587" data-toggle="tooltip" data-placement="top" title=""Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule." [GOC:mah]">GO:0016857</a></td><td class="col-xs-6">racemase and epimerase activity, acting on carbohydrates and derivatives</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/10977" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [ISBN:0198547684]">GO:0018130</a></td><td class="col-xs-6">heterocycle biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/13539" data-toggle="tooltip" data-placement="top" title=""Binding to a molybdenum ion (Mo)." [GOC:ai]">GO:0030151</a></td><td class="col-xs-6">molybdenum ion binding</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/17893" data-toggle="tooltip" data-placement="top" title=""A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore." [GOC:mah, PMID:11390404]">GO:0034755</a></td><td class="col-xs-6">iron ion transmembrane transport</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/20364" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in water." [GOC:jl]">GO:0042364</a></td><td class="col-xs-6">water-soluble vitamin biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/20668" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position." [GOC:jl, GOC:mah]">GO:0042726</a></td><td class="col-xs-6">flavin-containing compound metabolic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/20669" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position." [GOC:jl, GOC:mah]">GO:0042727</a></td><td class="col-xs-6">flavin-containing compound biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">CC</td><td class="col-xs-2"><a href="/go/view/20705" data-toggle="tooltip" data-placement="top" title=""An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxy-terminus of a precursor protein to a GPI-anchor." [GOC:jl, GOC:rb, PMID:12802054]">GO:0042765</a></td><td class="col-xs-6">GPI-anchor transamidase complex</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">BP</td><td class="col-xs-2"><a href="/go/view/22071" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule." [GOC:curators, GOC:pde, GOC:vw]">GO:0044283</a></td><td class="col-xs-6">small molecule biosynthetic process</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/24309" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of transition metal ions from one side of a membrane to the other. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver." [ISBN:0198506732]">GO:0046915</a></td><td class="col-xs-6">transition metal ion transmembrane transporter activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">CC</td><td class="col-xs-2"><a href="/go/view/38993" data-toggle="tooltip" data-placement="top" title=""A protein complex that is part of an endoplasmic reticulum." [GOC:pg]">GO:0140534</a></td><td class="col-xs-6">endoplasmic reticulum protein-containing complex</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">CC</td><td class="col-xs-2"><a href="/go/view/44441" data-toggle="tooltip" data-placement="top" title=""A protein complex which is capable of peptidase activity." [GO_REF:0000088, GOC:bhm, GOC:TermGenie, PMID:1689240]">GO:1905368</a></td><td class="col-xs-6">peptidase complex</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">CC</td><td class="col-xs-2"><a href="/go/view/44442" data-toggle="tooltip" data-placement="top" title=""A protein complex which is capable of endopeptidase activity." [GO_REF:0000088, GOC:bhm, GOC:TermGenie, PMID:1689240]">GO:1905369</a></td><td class="col-xs-6">endopeptidase complex</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr></tbody></table></div></div><div class="tab-pane fade" id="tab3default"><div class="table-responsive"><table class="table table-striped table-fixed" id="interpro_table"><thead><tr><th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th><th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th><th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th><th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th></tr></thead><tbody><tr><td class="col-xs-3"><a href="/interpro/view/5852">IPR006843</a></td><td class="col-xs-5">PAP/fibrillin_dom</td><td class="col-xs-2">96</td><td class="col-xs-2">243</td></tr></tbody></table></div></div></div></div></div><div class="row"><div class="col-lg-12 col-md-12 col-sm-12"><div class="panel panel-default"><div class="panel-heading" id="links">External Links</div><div class="table-responsive"><table class="table table-striped table-separated"><tbody><tr><td><em>No external refs found!</em></td></td></tr></tbody></table></div></div></div></div><div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"><div class="modal-dialog" role="document" style="width:1000px;height:800px;"><div class="modal-content"></div></div></div></div></div></div><footer class="footer" id="footer"><div class="container"><div class="row"><div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div><div class="col-xs-2"><a href="/about" class="text-muted">About</a></div><div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div><div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div><div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div></div></div></footer><div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"><div class="modal-dialog" role="document" style="width:1000px;height:800px;"><div class="modal-content"></div></div></div><div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"><div class="modal-dialog" role="document" style="width:1000px;height:800px;"><div class="modal-content"><div class="modal-body"><div id="leafy_loader"></div><p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ...</p><p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style> Close</button></p></div></div></div></div><script src="/static/js/jquery.min.js"></script><script src="/static/js/bootstrap.min.js"></script><script src="/static/js/stupidtable.min.js"></script><script src="/static/js/TweenMax.min.js"></script><script src="/static/js/jquery.qtip.min.js"></script><script src="/static/js/planet_loader.js"></script><script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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