Mp1g03870.1

Description : EF-Tu translation elongation factor

Gene families : OG_01_0001412 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001412_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g03870.1
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AT4G20360	No alias	RAB GTPase homolog E1B	0.17	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_38630V3.1	No alias	RAB GTPase homolog E1B	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04227.1	No alias	translation elongation factor (EF-Tu)	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0004655	porphobilinogen synthase activity	IEP	HCCA
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	HCCA
MF	GO:0004784	superoxide dismutase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	HCCA
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0030976	thiamine pyrophosphate binding	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0034311	diol metabolic process	IEP	HCCA
BP	GO:0034312	diol biosynthetic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	cellular amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044267	cellular protein metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0050997	quaternary ammonium group binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	314	382
IPR000795	T_Tr_GTP-bd_dom	89	290
IPR004160	Transl_elong_EFTu/EF1A_C	387	486

External Links

No external refs found!

Mp1g03870.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation