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  5. Mp1g10130.1

Mp1g10130.1


Description : IPO8 nucleocytoplasmic import karyopherin


Gene families : OG_01_0004257 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g10130.1
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT2G31660 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g562450 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_21650V3.1 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_22260V3.1 No alias ARM repeat superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 25 97
IPR013713 XPO2_central 197 428
No external refs found!