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  5. Mp1g10230.1

Mp1g10230.1


Description : component RPL17 of LSU proteome component


Gene families : OG_01_0001549 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g10230.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT1G27400 No alias Ribosomal protein L22p/L17e family protein 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G67430 No alias Ribosomal protein L22p/L17e family protein 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g568900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_5840V3.1 No alias Ribosomal protein L22p/L17e family protein 0.32 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_6650V3.1 No alias Ribosomal protein L22p/L17e family protein 0.19 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29840V3.1 No alias Ribosomal protein L22p/L17e family protein 0.31 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_25220V3.1 No alias Ribosomal protein L22p/L17e family protein 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_25240V3.1 No alias Ribosomal protein L22p/L17e family protein 0.34 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00364.1 No alias component uL22 of LSU proteome component 0.17 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 17 151
No external refs found!