Coexpression cluster: Cluster_141 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006412 translation 53.85% (35/65) 6.07 0.0 0.0
GO:0043043 peptide biosynthetic process 53.85% (35/65) 6.03 0.0 0.0
GO:0043228 non-membrane-bounded organelle 50.77% (33/65) 5.75 0.0 0.0
GO:0009059 macromolecule biosynthetic process 56.92% (37/65) 5.3 0.0 0.0
GO:0043603 cellular amide metabolic process 53.85% (35/65) 5.96 0.0 0.0
GO:0043604 amide biosynthetic process 53.85% (35/65) 6.01 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 56.92% (37/65) 5.44 0.0 0.0
GO:0006518 peptide metabolic process 53.85% (35/65) 5.99 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 50.77% (33/65) 5.75 0.0 0.0
GO:0005840 ribosome 50.77% (33/65) 5.99 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 53.85% (35/65) 5.27 0.0 0.0
GO:0005198 structural molecule activity 53.85% (35/65) 5.88 0.0 0.0
GO:0003735 structural constituent of ribosome 53.85% (35/65) 6.05 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 53.85% (35/65) 5.05 0.0 0.0
GO:0044249 cellular biosynthetic process 56.92% (37/65) 4.59 0.0 0.0
GO:0043229 intracellular organelle 50.77% (33/65) 5.02 0.0 0.0
GO:0043226 organelle 50.77% (33/65) 5.02 0.0 0.0
GO:1901576 organic substance biosynthetic process 56.92% (37/65) 4.5 0.0 0.0
GO:0009058 biosynthetic process 56.92% (37/65) 4.35 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 53.85% (35/65) 4.0 0.0 0.0
GO:0044267 cellular protein metabolic process 53.85% (35/65) 3.92 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 56.92% (37/65) 3.51 0.0 0.0
GO:0019538 protein metabolic process 53.85% (35/65) 3.63 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 53.85% (35/65) 3.27 0.0 0.0
GO:0043170 macromolecule metabolic process 56.92% (37/65) 3.09 0.0 0.0
GO:0044237 cellular metabolic process 56.92% (37/65) 2.81 0.0 0.0
GO:0110165 cellular anatomical entity 52.31% (34/65) 3.02 0.0 0.0
GO:0006807 nitrogen compound metabolic process 53.85% (35/65) 2.87 0.0 0.0
GO:0005575 cellular_component 53.85% (35/65) 2.77 0.0 0.0
GO:0071704 organic substance metabolic process 56.92% (37/65) 2.55 0.0 0.0
GO:0044238 primary metabolic process 53.85% (35/65) 2.56 0.0 0.0
GO:0009987 cellular process 60.0% (39/65) 2.3 0.0 0.0
GO:0008152 metabolic process 56.92% (37/65) 2.41 0.0 0.0
GO:0008150 biological_process 60.0% (39/65) 1.77 0.0 0.0
GO:0003674 molecular_function 73.85% (48/65) 1.2 0.0 0.0
GO:0003723 RNA binding 16.92% (11/65) 4.1 0.0 0.0
GO:0019843 rRNA binding 6.15% (4/65) 6.42 0.0 0.0
GO:0003676 nucleic acid binding 20.0% (13/65) 2.41 1e-06 2e-06
GO:0008135 translation factor activity, RNA binding 4.62% (3/65) 4.68 0.000217 0.000444
GO:0045182 translation regulator activity 4.62% (3/65) 4.68 0.000217 0.000444
GO:0090079 translation regulator activity, nucleic acid binding 4.62% (3/65) 4.68 0.000217 0.000444
GO:0006414 translational elongation 3.08% (2/65) 6.42 0.000229 0.000458
GO:0003746 translation elongation factor activity 3.08% (2/65) 6.22 0.000305 0.000596
GO:1901363 heterocyclic compound binding 23.08% (15/65) 1.17 0.002059 0.003843
GO:0097159 organic cyclic compound binding 23.08% (15/65) 1.17 0.002059 0.003843
GO:0015934 large ribosomal subunit 1.54% (1/65) 7.22 0.006683 0.011944
GO:0044391 ribosomal subunit 1.54% (1/65) 7.22 0.006683 0.011944
GO:0008097 5S rRNA binding 1.54% (1/65) 6.64 0.010008 0.017513
GO:0005852 eukaryotic translation initiation factor 3 complex 1.54% (1/65) 5.9 0.016625 0.028499
GO:0005488 binding 29.23% (19/65) 0.67 0.021614 0.036312
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_39 0.072 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_43 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_53 0.087 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_74 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_122 0.089 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_134 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_140 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_167 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_183 0.028 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_207 0.074 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_17 0.316 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_26 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_93 0.181 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_9 0.053 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_80 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_100 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_48 0.075 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_53 0.034 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_58 0.28 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_115 0.239 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_121 0.086 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_132 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_134 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_169 0.031 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_191 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_202 0.37 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_211 0.086 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_228 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_246 0.077 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_273 0.037 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_285 0.063 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_7 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_14 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_56 0.048 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_69 0.161 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_72 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_96 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_98 0.047 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_174 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (65) (download table)

InterPro Domains

GO Terms

Family Terms